Form ¹ Í - 3.04
STATE INSTITUTION OF HIGHER EDUCATION “I.Y.HORBACHEVSKY
TERNOPIL STATE MEDICAL UNIVERSITY OF THE MINISTRY OF PUBLIC HEALTH OF UKRAINE”
(full name of university)
Department of Social Medicine, Organization and Economics of Health Care,
and Medical Statistics
First Vice Rector
Ihor R. Mysula,
M.D., Ph.D
August 29, 2013
Syllabus
(code and name of
discipline)
training course 1201 Medicine
(code and name of the field
of study)
specialty
7.12010001 "General Medicine"
(code and name of specialty)
faculty Medical
(name of institution,
faculty, department)
Academic
Year 2013 – 2014
(name of discipline)
Field of
Training 1201 Medicine,
Specialty 7.12010001" General Medicine"
The
author:
Panchyshyn N.Ya. PhD., associate
prof., Department of
Social Medicine, Organization and Economics of Health Care, and Medical
Statistics.
(authors, their positions, academic degrees and titles)
Syllabus approved at the Department of Social
Medicine, Organization and Economics of Health Care, and Medical Statistics
Minutes No 1 as of August 27, 2013
Head of Social Medicine, Organization and
Economics of Health Care, and
____________________ (Shulhai A.H.)
Ó__________, 2013 year
Ó __________, 2014
year
1. Description of the Discipline
Name
of indicators |
Branch
of knowledge, direction of training, educational qualification level |
Characteristics
of the discipline |
full-time education |
||
Number of credits – 1,5 |
field of knowledge ____1201 Medicine___ (code and name) |
Normative |
|
||
Modules – 1 |
Specialty:
7.12010001 "General Medicine" |
Year
of study |
Content Modules– 2 |
4-th |
|
|
Term |
|
Total number of hours – 45 |
7-th |
|
Lectures |
||
Weekly hours for
the full-time study: auditorium hours – 1,4 Individual work of students – 0,85 |
Educational
qualification level: specialist |
10 hours |
Practical
classes |
||
18 hours |
||
Laboratory
classes |
||
– |
||
Individual work |
||
17 hours |
||
Individual
tasks: |
||
– |
||
Type
of evaluation: |
||
Test control module |
Note.
Ratio of classroom hours to self-study and individual
work is (in %):
for full-time study - 62.2:
37.8
2. Purpose and objectives of the discipline
Purpose: The aim of biostatistics is the study and analysis of the main statistical indicators for evidence-based medicine, which lays the bases of developing skills summarizing and analysis of biomedical, clinical and environmental data.
Objectives:
• studying the theoretical and methodological bases of biostatistics;
• evaluation and analysis of
statistical indicators and parameters of a statistical totalities;
• gaining practical knowledge and skills using applied
biostatistics methods for data analysis;
• mastering of the theoretical and methodological bases
of statistical analysis of the results of their assessment and description in
order to develop reasonable conclusions;
• training and education of doctors in grounded
socio- medical basis.
As a result of studying of the discipline the student should
know:
- Theoretical foundations, the modern principles
of evidence-based medicine;
- Theoretical foundations of biostatistics;
- Methodological and Theoretical
Foundations of statistical totalities
for further adequate for their analysis;
be able to:
- Identify and analyze the main biostatistics indicators and criteria;
- Evaluate the results of the analysis on individual criteria and in
conjunction with the factors that affect them.
3. Program of Academic discipline
MODULE 1.
BIOSTATISTICS
Content module 1
INTRODUCTION INTO BIOSTATISTICS. EPIDEMIOLOGICAL RESEARCHES AND THEIR ANALYSIS.
SPECIFIC OBJECTIVES:
• know the definition of biostatistics as
a discipline and its role in the system of evidence-based medicine;
• master the theoretical and
methodological foundations of biostatistics;
• master the basic organizational
elements of statistical analysis, it is methodical and practical aspects;
• master the basic approaches and
indicators to characterize the statistical evaluation of data sets and
dynamics;
• be able to assess and analyze
statistical data and statistical parameters totalities .
TOPIC 1. METHODOLOGICAL FOUNDATIONS OF
STATISTICAL RESEARCHES IN HEALTH CARE SYSTEM.
Theory and concepts of statistical observation stages of its implementation. Methodological foundations,
forms and methods of statistical observation
and data collection. The accuracy of the observations.
Using different measurement scales: absolute, ordinal, interval, relations.
Sources of statistical information. Types of statistics, statistical reporting, sample
surveys.
Marketing and public opinion polls, the types of
questions in the survey, the problem of surveys in health care.
Types of sample surveys, the concept of randomization
and stratification, the design of clinical researches.
Grouping of statistical data, methods, meaning. Types of groupings , the
principles of statistical groupings and classifications. Comparability
of statistical groupings. The concept of
multidimensional classification.
Statistical tables, their characteristics, types and rules of
construction.
Methodological foundations of reading and
analysis of tables.
The concept of non-numeric data qualitative features.
TOPIC 2. RELATIVE VALUES (STATISTICAL COEFFICIENTS). GRAPHICAL ANALYSIS METHODS.
The concept of statistical indicators, their types, forms
of representation.
Absolute data relative values, their practical importance.
Types of relative values method of their calculation
and methodical basis of the application for data analysis.
The concept and types of structures of biomedical
data, structural changes, especially their analysis.
Graphical methods for data analysis. Types of schedules, rules of their construction.
TOPIC 3. RISK FACTORS. METHOD OF CALCULATION AND RISK ASSESSMENT.
The concept of risk factors. Risk indicators, methods of
calculation and analysis. Absolute, additional risk.
Relative risk, the additional population risks. The odds ratio.
Practical use of risk assessment methodology.
TOPIC 4. METHOD OF STANDARDIZATION.
Problems of comparison of statistical indicators.
Types of methods of standardization, characteristic,
evaluation of the results.
TOPIC 5. DYNAMIC LINES AND THEIR ANALYSIS.
Type of dynamic lines. Basic rules for the construction and analysis of dynamic
lines in the study of the dynamics of biomedical phenomena.
The main indicators of dynamic lines analysis.
Basic techniques for handling dynamic lines for
determining the trend.
The study and measurement of seasonal variations in dynamic
lines.
Comparability of dynamic lines.
Interpolation and extrapolation of dynamic lines.
The prediction based on extrapolation of dynamic lines.
Content module 2.
ANALYTICAL STATISTICS.
SPECIFIC OBJECTIVES:
• obtain
skills and abilities formation of
statistical hypotheses;
• be able to analyze and
evaluate statistical models for
their main characteristics, indicators.
• master the
methodical basics and the main criteria for selecting of adequate methods of analysis for testing statistical hypotheses;
• obtain
practical knowledge and skills
using applied biostatistics
methods for data analysis;
• master the theoretical and
methodological foundations of statistical analysis of the results of their
assessment and description in order to develop reasonable conclusions.
TOPIC 6. Characteristic and analysis of
statistical data. Averages and variation indexes.
Average values in clinical and epidemiological studies, their types,
practical importance, methods of calculation.
Concept of variation and its significance. The variability of the parameters
of a totality, methods of evaluation. Absolute numbers
of variation, standard deviation, their assessment. Ratios variation:
coefficients of variation and determination.
Measures of variation, concept of the laws of
distribution, types, characteristics.
TOPIC 7. Parametrical methods of estimation
and analysis of statistical hypotheses.
Selective observation as a source of statistical
information.
Zero and alternative hypotheses.
The errors of the first and second kind. Significant statistical criteria.
The average error and the average relative size,
confidence interval.
Estimation of the probability difference: Student test
, method of calculation , its evaluation, the use of common errors .
Theme 8. Nonparametric methods of estimation
and analysis of statistical hypotheses.
Justification of the use cases nonparametric methods to assess their
value.
Types of comparable totalities and their
characteristics.
Analysis and evaluation of related collections criterion marks Wilcoxon.
Testing of statistical hypotheses for independent samples, the
Kolmogorov- Smirnov test, Yait, serial.
Xi- square criterion, its assessment and practice application.
SUBJECT 9. Analysis of correlation between statistical indexes
of population..
Studying the link between quantitative variables. Correlation , types of
correlation coefficients .
The coefficient of linear correlation, its estimation,
characteristic.
Non-parametric estimation methods of communication - rank correlation
coefficient.
Regression analysis, regression coefficient,
regression equation. Using regression analysis for prediction.
4. The structure academic discipline
Content
Modules and Themes |
Hours |
|||||||
Full-time |
||||||||
all |
including |
|||||||
Lect. |
Pract. |
Labs |
Indiv. |
Self-study |
||||
1 |
2 |
3 |
4 |
5 |
6 |
7 |
||
Module 1. Biostatistics |
||||||||
Content
module 1. Introduction
to Biostatistics. Epidemiologic research and its analysis. |
||||||||
Theme 1. Concept and role of Biostatistics
as the basic component of the system of evidence-based medicine, history of
development and value for health care. |
3 |
2 |
|
|
|
1 |
||
Theme
2. Epidemiological studies in health care, their description and
analysis. Fundamentals of Biostatistics,
its importance in the practice of public
health. |
3 |
2 |
|
|
|
1 |
||
Theme 3. Methodological basis of statistical
studies in the organization of health care. |
4 |
|
3 |
|
|
1 |
||
Theme 4. Clinical epidemiology. Modern
principles and rules of conducting clinical research. Concept of null
hypothesis, principles of randomization and stratification in medical
research. |
3 |
2 |
|
|
|
1 |
||
Theme 5. Relative values (statistical
indices). Graphic methods of analysis. |
4 |
|
3 |
|
|
1 |
||
Theme 6. Risk factors, method of risk
calculation and assessment. |
1 |
|
|
|
|
1 |
||
Theme 7. Analysis of epidemiologic research
indexes, risk estimation. |
1 |
|
|
|
|
1 |
||
Theme 8. Method of standardization. |
4 |
|
3 |
|
|
1 |
||
Theme 9. Series of dynamics and their
analysis. |
4 |
|
3 |
|
|
1 |
||
Total for content module1 |
27 |
6 |
12 |
|
|
9 |
||
Content
module 2. Analytical statistics. |
||||||||
Theme 10. Characteristic and
analysis of statistical data. Averages and variation indexes. |
3 |
|
2 |
|
|
1 |
||
Theme 11. Parametrical methods of
estimation and analysis of statistical hypotheses. |
2 |
|
1 |
|
|
1 |
||
Theme 12. Nonparametrical methods of estimation and analysis of statistical
hypotheses. |
2 |
|
1 |
|
|
1 |
||
Theme 13. Analysis of correlation
between statistical indexes of population. |
3 |
|
2 |
|
|
1 |
||
Theme 14. Types of information,
principles of forming of statistical sample (database) for analysis.
Generalization of results of statistical research, meta-analysis. Analysis of
qualitative parameters, modern approaches to the analysis and estimation of
quality of living. Types and characteristics of questionnaires. |
3 |
2 |
|
|
|
1 |
||
Theme 15. Gathering data for epidemiologic and clinical research. Role of
official statistics in the analysis of population health, its advantages and
disadvantages. European database “Health for all”. Statistical research
software. |
3 |
2 |
|
|
|
1 |
||
Total for content module 2 |
16 |
4 |
6 |
|
|
6 |
||
Preparation for the final evaluation on module 1.
|
2 |
|
|
|
|
2 |
||
Course Paper – not applicable
|
- |
|
- |
|
|
- |
||
Total hours
|
45 |
10 |
18 |
|
|
17 |
||
5. Themes of Lectures
No |
Themes of lectures |
Number
of hours |
Module 1. Biostatistics |
||
Content module 1. Introduction to Biostatistics.
Epidemiologic research and its analysis. |
||
1 |
Concept and role of Biostatistics
as the basic component of the system of evidence-based medicine, history of
development and value for health care. |
2 |
2 |
Clinical epidemiology. Modern principles and rules
of conducting clinical research. Concept of null hypothesis, principles of
randomization and stratification in medical research. |
2 |
Content module 2. Analytical statistics. |
||
3 |
Types of information, principles
of forming of statistical sample (database) for analysis. Generalization of
results of statistical research, meta-analysis. Analysis of qualitative
parameters, modern approaches to the analysis and estimation of quality of
living. Types and characteristics of questionnaires. |
2 |
4 |
Basics
of biostatistics, its values in practice of health care. |
2 |
5 |
Gathering data for epidemiologic and clinical
research. Role of official statistics in the analysis of population health,
its advantages and disadvantages. European database “Health for all”.
Statistical research software. |
2 |
Total |
10 |
6. Themes of Seminar Classes - not applicable
7. Themes of Practical Classes
No |
Theme |
Number
of hours |
|
Module 1. Biostatistics |
|||
Content module 1.
Introduction to Biostatistics. Epidemiological research and its analysis. |
|||
1. |
Biostatistics and its value for
estimation of population health and activity of health care institutions.
Organization of statistical research in the system of health care. Relative
values. |
6 |
|
2. |
Series of dynamics and their
analysis. Direct method of index standardization. Graphic methods of
analysis. |
6 |
|
Content module
2. Analytical statistics |
|||
3. |
Characteristic and analysis of statistical data. Averages and variation
indexes. Parametrical and nonparametric methods of
estimation and analysis of statistical hypotheses. Analysis
of correlation between indexes of statistical samples. |
6 |
|
Total |
18 |
||
8. Themes of Labs – not applicable
9. Self-Study
No |
Theme |
Number
of hours |
Module 1. Biostatistics |
||
Content module
1. Introduction to Biostatistics. Epidemiological research and its analysis. |
||
1. |
Concept and role of Biostatistics as the basic component of the system
of evidence-based medicine, history of development and value for health care. |
1 |
2. |
Epidemiological studies in health care, their description and analysis. Fundamentals of Biostatistics, its importance in the
practice of public health. |
1 |
3. |
Methodological basis of statistical studies in the organization of
health care. |
1 |
4. |
Clinical epidemiology. Modern principles and rules of conducting
clinical research. Concept of null hypothesis, principles of randomization
and stratification in medical research. |
1 |
5. |
Relative values (statistical indices). Graphic methods of analysis. |
1 |
6. |
Risk factors, method of risk calculation and assessment. |
1 |
7. |
Analysis of epidemiologic research indexes, risk estimation. |
1 |
8. |
Method of standardization. |
1 |
9. |
Series of dynamics and their analysis. |
1 |
Content module 2. Analytical statistics |
||
10. |
Characteristic
and analysis of statistical data. Averages and variation indexes. |
1 |
11. |
Parametrical
methods of estimation and analysis of statistical hypotheses. |
1 |
12. |
Nonparametrical methods of
estimation and analysis of statistical hypotheses. |
1 |
13. |
Analysis of
correlation between statistical indexes of population. |
1 |
14. |
Types of
information, principles of forming of statistical sample (database) for
analysis. Generalization of results of statistical research, meta-analysis.
Analysis of qualitative parameters, modern approaches to the analysis and
estimation of quality of living. Types and characteristics of questionnaires. |
1 |
15. |
Gathering data
for epidemiologic and clinical research. Role of official statistics in the
analysis of population health, its advantages and disadvantages. European
database “Health for all”. Statistical research software. |
1 |
Preparation for the final evaluation on module 1. |
2 |
|
Total |
17 |
10. Individual work - not applicable
11. Teaching Methods
According to sources of knowledge, the following teaching methods are
used: word – narration, explanation, lecture, briefing, visual
– demonstration, illustration, practical – practical work tasks.
According to the nature of the logic of knowledge, the following methods
are used: analytical, synthetic, analytical-synthetic, inductive, deductive.
In terms of individual mental activity, the following methods are used:
problematic, exploration, research.
12. Methods of Evaluation
Forms of Testing and Evaluation
In evaluation of students' knowledge, standardized
methods of evaluation are primarily used: test (oral, written, computer-based),
structured written work, structured monitoring of
practical skills.
Subject grade is defined as the module grade according
to the course structure.
Assessment for the module is the sum of daily grades
and evaluation of the final module test and based on 200-point system.
Forms of evaluation
Daily evaluation is
performed each class for specific topics. At all classes, objective evaluation
of theoretical knowledge and practical skills is done.
Forms of daily evaluation:
Theoretical knowledge – tests, computer-based tests, individual surveys, interviews, written
work.
Practical skills – independent individual tasks and the ability to draw conclusions on
their own ability to perform certain transactions, writing schemes and
algorithms. Final test is based on
theoretical knowledge, practical skills and abilities.
Final test of the
module takes place at the end of study of the relevant content modules in the
form of a test and is considered passed if the student scored at least 50
points.
Forms of final test:
Theoretical knowledge – a system of questions for written and computer-based testing.
Practical skills and ability – using basic methods of medical statistics in
conducting and evaluating biomedical researches taking into account the main
provisions of evidence-based medicine, a comprehensive assessment of health in
relation to social and environmental factors in determined area.
13. Distribution of points received by students
Maximum number of points assigned to students in
mastering the module (test credits) – 200, including daily scores – 120 points,
results of final module test – 80 points.
Evaluation of daily training:
At each stage of a practical class (practical,
seminar, written test) students are assigned rating in the 12-point scale. Then
arithmetic mean of the three evaluations is derived and noted in the register.
For each phase of the practical part of a class,
students get points as follows:
1. At the
beginning of the practical part, students must qualify for practical work (they
must know the process of practical work, etc.). For this stage students can get
a maximum of 2 points.
2.
Practical work is monitored by the teacher and assessed at the end. Students
can get a maximum of 4 points for this type of work.
3. Defense of practical work. At this stage, students
can receive a maximum of 6 points.
At the end of practical part, the teacher calculated
the mean of the scores for each part of the class and notes it down for each
student.
DISTRIBUTION OF POINTS RECEIVED BY STUDENTS
No |
Module No 1 (daily test) |
Grade |
1 |
Content Module 1 |
|
|
Class 1 |
12 |
|
Class 2 |
12 |
2 |
Content Module 2 |
|
|
Class 3 |
12 |
|
Average score for the class is converted into the
assessment scale |
120 points |
Final test for Module No 1 |
80 |
|
Total points for Module 1 |
200 |
The minimum grade point average that qualifies a
student to take final module test – 4 points.
The maximum points that can be earned by a student
during module is 120 points.
Final module test:
Final module test is taken at the end of a module.
Students who have completed all work stipulated by the curriculum and whose
score for the module reached the minimum, qualify for the final test.
The final evaluation should be standardized and
include testing in theoretical and practical training. Specific forms of
evaluation for the Biostatistics are stated in the syllabus.
The maximum of final test points is 80.
The final module test is passed if a student scores at
least 50 points.
Grades for the subject:
Grades for the Biostatistics are received only by
students who have completed all modules in the discipline.
The number of points that a student earns for the
discipline is defined as the average of points for the modules of the
discipline and for the final test of Module 1.
Objectivity of assessment of students must be checked
by statistical methods (correlation between the current progress and results of
the final module test).
Conversion of points for Biostatistics into grades according to the ECTS scale and
4-point scale (traditional)
Number of points that a student gets for a discipline
is converted into the ECTS scale as follows:
ECTS scale |
Statistical index |
A |
Top 10% of students |
B |
Next 25% of students |
C |
Next 30% of students |
D |
Next 25% of students |
E |
Last 10% of students |
Percentage of students is determined out of students
of the same year of study within the same specialty.
Number of points for a discipline earned by a student
is converted into 4-point scale as follows:
ECTS scale |
4-point scale |
A |
"5" |
B, C |
"4" |
D, E |
"3" |
FX, F |
"2" |
FX and F ("2") score for a discipline is
assigned to a student who has not passed at least one module of the discipline.
FX ("2") score is assigned to students who
earned the minimum number of points for daily academics, but have not passed
the final module test. They have the right to repeat the final module test up
to 2 times during winter break or in two (additional) weeks after the end of
the spring semester schedule approved by the Rector.
Students who received an F score after completing the
course (have not completed the program of at least one module or have not
earned the minimum number of points in the current module) must undergo
re-training according to the individual curriculum.
Grading scale: national and ECTS
Total points for all kinds of learning activities |
ECTS score |
Evaluation on the national scale |
|
for examination, course project, practice |
for credit |
||
|
A |
excellent |
passed |
|
B |
good |
|
|
C |
||
|
D |
satisfactory |
|
|
E |
||
|
FX |
failed, allowed to re-take |
failed, allowed to re-take |
|
F |
failed, with mandatory re-training |
failed, with mandatory re-training |
14. Methodological Support
1. Materials for the practical classes
2. Materials for the lectures.
3. Presentations of lectures.
4. Guides for practical classes.
5. Tasks for self-study and individual work of students.
6. Tests for the final evaluation.
7. Tests for daily evaluation.
8. Variants of theoretical questions for self-study.
15. Suggested Reading
Basic
1. Holyachenko, A. Shulhai, O. Nykytyuk.
Social medicine and health protection organizations. – Ternopil,
“Ukrmedknyga”, 2004. – 171 p.
2. A. Indrayan.
Medical Biostatistics, Third Edition. – Chapman & Hall/CRC Press, 2012. – 1008
p.
3. Fundamentals of Biostatistics (7th Edition). – English, 2010. – 891 p.
4. Michael J. Campbell, David Machin, Stephen J.
Walters. Medical Statistics: A Textbook for the Health Sciences, 4th Edition. – Paperback, 2006. – 344
p.
5. Frank Emmert-Streib and
Matthias Dehmer. Medical Biostatistics for Complex
Diseases". – Wiley-Blackwell, 2010. – 412 p.
6. Michael R. Chernick. The Essentials of
Biostatistics for Physicians, Nurses, and Clinicians. – Wiley, 2011. – 538 p.
Additional
1.
Shein-Chung Chow. Controversial Statistical Issues in Clinical Trials (Chapman
& Hall/CRC Biostatistics Series). – Chapman and Hall/CRC,
2011. – 611 p.
2.
Peter Armitage, Theodore
Colton. Encyclopedia of Biostatistics: 8-Volume. –John Wiley & Sons,
2005. – 6100 p.
3.
Gerald van Belle, Patrick J.
Heagerty. Biostatistics: A Methodology for the Health
Sciences (Wiley Series in Probability and Statistics). –Wiley-Interscience; 2 edition, English, 2004. – 888 p.
4.
Riccardo Rizzo.
Computational Intelligence Methods for Bioinformatics and Biostatistics: 7th
International Meeting. – Palermo, Italy, CIBIB, 2011. 301 p.
5.
Robert C. Elston, William Johnson. Basic Biostatistics for
Geneticists and Epidemiologists: A Practical Approach. – Wiley, 2008. – 384 p.
6.
Steve Selvin.
Survival Analysis for Epidemiologic and Medical Research (Practical Guides to
Biostatistics and Epidemiology) – Cambridge University
Press, 2008. – 296 p.
16. Information Resources
2. Bernard A. Rosner.
Fundamentals of Biostatistics. - Cengage Learning,
2006. – 868 p.
3. Practical classes materials.